Accelerating SeqAn
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This project targets specifically the acceleration of the pairwise alignment algorithms and pattern matching algorithms contained in the SeqAn library. ...learn more
Project status: Concept
Overview / Usage
SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. Our library applies a unique generic design that guarantees high performance, generality, extensibility, and integration with other libraries. SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance.
Technologies Used
Intel's OneAPI profiler and code analyser
Repository
https://github.com/seqan/seqan3